Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38394.1Regulatory protein, LacI. (345 aa)    
Predicted Functional Partners:
EFL38393.1
Beta-mannosidase.
 
     0.897
EFL42741.1
LacI family transcriptional regulator.
  
     0.772
EFL38392.1
Sugar transport system sugar-binding lipoprotein c.
       0.768
EFL43466.1
LacI family transcriptional regulator.
  
     0.765
EFL41895.1
Glutamate synthase large subunit.
    
 
 0.759
EFL38395.1
Beta-ketoadipyl CoA thiolase PhaD; Belongs to the thiolase-like superfamily. Thiolase family.
       0.739
EFL38396.1
Fatty acid oxidation complex alpha-subunit.
       0.739
EFL38390.1
Sugar transport system permease; Overlaps another CDS with the same product name.
       0.698
EFL38391.1
Sugar transport system permease; Overlaps another CDS with the same product name.
       0.698
EFL38677.1
HPr family phosphocarrier.
   
 
 0.620
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.