Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38398.1Conserved hypothetical protein. (482 aa)    
Predicted Functional Partners:
EFL39783.1
Conserved hypothetical protein.
  
     0.770
EFL41979.1
Conserved hypothetical protein.
  
     0.767
EFL40923.1
Membrane protein.
  
     0.760
EFL41178.1
SEC-C domain-containing protein.
  
     0.759
EFL39674.1
Integral membrane protein.
  
     0.740
EFL40958.1
Integral membrane protein.
  
     0.740
EFL40146.1
Conserved hypothetical protein.
  
     0.732
EFL41088.1
Integral membrane protein.
 
     0.720
EFL39784.1
Conserved hypothetical protein.
  
     0.712
EFL40603.1
ABC transport system transmembrane protein; Unextendable partial coding region.
  
     0.711
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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