close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38406.1Sugar ABC transporter, ATP-binding protein. (260 aa)    
Predicted Functional Partners:
EFL38405.1
Sugar ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
EFL38407.1
Solute binding protein.
 
 0.960
EFL38409.1
ABC-type sugar transport system, permease component.
    
  0.936
EFL40218.1
Solute binding protein.
 
 0.927
EFL40270.1
Sugar ABC transporter, periplasmic sugar-binding protein.
 
 
 0.926
EFL38411.1
Extracellular solute-binding domain-containing protein.
    
  0.923
EFL43002.1
ABC sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.897
EFL43003.1
ABC sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.894
EFL43195.1
ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 0.880
EFL37967.1
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 0.879
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.