STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38408.1ROK family transcriptional regulator. (403 aa)    
Predicted Functional Partners:
EFL37481.1
PTS system, IIBC component.
  
 0.922
EFL40863.1
PTS system, fructose-specific family, IIABC component.
    
 0.795
EFL38409.1
ABC-type sugar transport system, permease component.
     
 0.766
EFL38410.1
ABC-type sugar transport system, permease component.
     
 0.751
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.688
EFL38411.1
Extracellular solute-binding domain-containing protein.
     
 0.687
EFL41147.1
PTS system glucose-specific EIICBA component.
   
 0.651
EFL38406.1
Sugar ABC transporter, ATP-binding protein.
  
  
 0.635
EFL38405.1
Sugar ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
       0.630
EFL41145.1
PTS system n-acetylglucosamine-specific EIICBA component; Truncated CDS.
   
 0.622
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.