STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38413.1Cellulose binding protein. (362 aa)    
Predicted Functional Partners:
EFL42491.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.865
EFL37692.1
Chitinase.
 
 
 0.830
EFL39076.1
Chitinase 63.
 
  
0.749
EFL39414.1
Exochitinase 1; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.741
EFL37985.1
Cellulose 1,4-beta-cellobiosidase.
  
     0.736
EFL40607.1
Pectinesterase/pectate lyase protein.
  
  
 0.727
EFL37469.1
Endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
     0.717
EFL42473.1
Endoglucanase E-2; Belongs to the glycosyl hydrolase family 6.
  
     0.675
EFL39558.1
beta-N-Acetylglucosaminidase.
     
 0.657
EFL41109.1
beta-N-acetylhexosaminidase.
     
 0.657
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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