STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38420.1Transmembrane transporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (517 aa)    
Predicted Functional Partners:
EFL42101.1
Integral membrane protein.
 
  
 0.929
EFL38690.1
Membrane protein.
 
  
 0.927
EFL38419.1
Integral membrane protein.
       0.878
EFL42644.1
Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.764
EFL38421.1
Riboflavin biosynthesis protein RibD domain-containing protein.
       0.552
EFL38418.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
       0.440
EFL38224.1
acetyl-CoA synthetase.
 
  
 0.407
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.