STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38424.1GntR family transcriptional regulator. (241 aa)    
Predicted Functional Partners:
EFL40464.1
GntR-family transcriptional regulator.
  
    0.761
EFL41744.1
Regulatory protein GntR, HTH.
  
  
 0.754
EFL40304.1
GntR family transcriptional regulator.
  
  
 0.752
EFL42853.1
GntR family transcriptional regulator.
  
  
 0.736
EFL43403.1
GntR family transcriptional regulator.
  
    0.687
EFL40470.1
korSA, regulatory protein.
  
    0.686
EFL40181.1
GntR-family transcriptional regulator.
  
  
 0.684
EFL37748.1
GntR-family regulatory protein.
  
  
 0.660
EFL37406.1
GntR family transcriptional regulator.
  
  
 0.652
EFL39745.1
Transcriptional regulator.
  
    0.602
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.