STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38436.1Conserved hypothetical protein. (294 aa)    
Predicted Functional Partners:
EFL40834.1
Conserved hypothetical protein.
  
     0.549
EFL43163.1
Conserved hypothetical protein.
  
     0.549
vapC-4
PIN family toxin-antitoxin system, toxin component; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
  
     0.542
EFL43475.1
Conserved hypothetical protein.
  
     0.540
EFL41291.1
Conserved hypothetical protein.
  
     0.482
EFL37453.1
Conserved hypothetical protein.
  
     0.481
EFL39327.1
Membrane protein.
  
     0.479
EFL42827.1
Conserved hypothetical protein.
  
     0.463
EFL38433.1
Xre family toxin-antitoxin system, antitoxin component.
 
     0.425
EFL38435.1
Hypothetical protein.
       0.414
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.