STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38441.1PE-PGRS family protein. (465 aa)    
Predicted Functional Partners:
EFL42076.1
Magnesium chelatase.
  
 0.829
EFL38440.1
Non-specific serine/threonine protein kinase.
 
     0.814
EFL41320.1
FHA domain-containing protein.
 
     0.805
EFL41322.1
Conserved hypothetical protein.
 
     0.785
EFL41323.1
Non-specific serine/threonine protein kinase.
 
     0.770
EFL38442.1
Conserved hypothetical protein.
       0.677
EFL38443.1
Conserved hypothetical protein.
       0.677
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 
  0.652
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 
  0.652
EFL42077.1
Cobaltochelatase, CobN subunit.
  
 0.533
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.