STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38446.1Oligopeptide/dipeptide ABC transporter, ATP-binding protein. (222 aa)    
Predicted Functional Partners:
EFL38448.1
Peptide ABC transporter, permease.
 
 0.963
EFL39312.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
0.960
EFL43420.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
0.960
EFL38065.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.957
EFL38447.1
ABC transporter ATP-binding protein.
  
 
 0.933
EFL38449.1
Transport permease.
 
 
 0.930
EFL38450.1
XP55.
 
 
 0.909
EFL39319.1
ABC transporter integral membrane protein.
 
 0.876
EFL38963.1
ABC transporter, permease.
 
 
 0.856
EFL39313.1
Peptide ABC transporter, permease.
 
 0.856
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.