STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38488.1Transcriptional regulator, GntR-family. (254 aa)    
Predicted Functional Partners:
EFL40128.1
Regulatory protein GntR, HTH.
  
     0.763
EFL40849.1
Regulatory protein KorSA, GntR-family transcriptional regulator.
  
     0.758
EFL40462.1
GntR-family regulator.
  
     0.757
EFL40760.1
Transcriptional regulator (GntR family).
  
     0.719
EFL40130.1
KorA.
  
     0.710
EFL38539.1
GntR family transcriptional regulator.
  
    0.640
EFL39333.1
GntR-family transcriptional regulator.
  
     0.612
EFL37768.1
L-asparagine operon repressor (GntR family).
  
    0.593
EFL42290.1
GntR-family transcriptional regulator.
  
    0.568
EFL38424.1
GntR family transcriptional regulator.
  
    0.559
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.