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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38496.12,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. (181 aa)    
Predicted Functional Partners:
EFL39623.1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.898
EFL42655.1
Succinate-semialdehyde dehydrogenase.
  
 
 0.893
EFL41712.1
Isomerase.
  
  
 0.852
EFL40018.1
Benzaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.811
EFL43342.1
Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.811
EFL38495.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.792
EFL38494.1
Conserved hypothetical protein.
       0.782
EFL43255.1
Succinate-semialdehyde dehydrogenase [NADP+] (SSDH).
  
 
 0.739
EFL38218.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
     
 0.708
EFL42910.1
Mandelate racemase/muconate lactonizing enzyme domain-containing protein.
  
 
 0.690
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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