Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL38503.1Flavin reductase. (173 aa)    
Predicted Functional Partners:
EFL39371.1
Syringomycin synthetase.
    
  0.763
EFL43231.1
ferredoxin-NADP reductase.
     
 0.729
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
    
  0.705
EFL37540.1
Condensation domain-containing protein.
    
  0.705
EFL38504.1
Sarcosine oxidase.
     
 0.705
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.704
EFL42807.1
FMN reductase.
 
  
 0.702
EFL43010.1
Bifunctional P-450/NADPH-P450 reductase; Truncated CDS; unextendable partial coding region; Belongs to the cytochrome P450 family.
     
 0.700
EFL39909.1
FMN reductase.
 
  
 0.695
EFL38775.1
Riboflavin biosynthesis protein RibF.
    
 0.640
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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