STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38513.1Cytosine deaminase. (498 aa)    
Predicted Functional Partners:
EFL38213.1
Hydroxydechloroatrazine ethylaminohydrolase.
  
     0.754
EFL43231.1
ferredoxin-NADP reductase.
  
 
  0.673
EFL42516.1
Hydantoinase/oxoprolinase.
     
  0.665
EFL37516.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
 
 0.643
EFL37281.1
S-adenosyl-L-homocysteine hydrolase.
 
  
  0.585
EFL40007.1
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
 0.583
EFL39504.1
Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
    
 0.581
EFL40868.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
    
 0.581
EFL37946.1
Inosine-uridine preferring nucleoside hydrolase.
  
 
 0.580
EFL40114.1
Modification methylase NaeI; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
   
 
  0.573
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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