Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38544.1Transmembrane efflux protein (MFS). (694 aa)    
Predicted Functional Partners:
EFL38543.1
Cysteine synthase; Truncated CDS.
 
    0.843
EFL38545.1
Conserved hypothetical protein.
 
     0.774
EFL38546.1
Peptide/nickel/opine uptake family ABC transporter, permease.
 
     0.681
EFL38542.1
Conserved hypothetical protein.
 
     0.662
EFL38541.1
ATP-grasp domain-containing protein.
 
     0.632
EFL42248.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.523
EFL38540.1
GNAT family acetyltransferase.
 
     0.482
EFL42578.1
Conserved hypothetical protein.
  
     0.409
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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