STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38545.1Conserved hypothetical protein. (512 aa)    
Predicted Functional Partners:
EFL38546.1
Peptide/nickel/opine uptake family ABC transporter, permease.
 
  0.986
EFL38065.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.952
EFL38963.1
ABC transporter, permease.
 
  0.894
EFL38449.1
Transport permease.
 
  0.890
EFL42811.1
Oligopeptide/dipeptide ABC transporter, permease.
 
  0.887
EFL38964.1
Dipeptide transport system permease DppB.
 
  0.885
EFL38448.1
Peptide ABC transporter, permease.
 
  0.883
EFL39313.1
Peptide ABC transporter, permease.
 
  0.867
EFL42812.1
ABC peptide transporter, permease component.
 
  0.867
EFL39314.1
Peptide ABC transporter, permease.
 
  0.862
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.