STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38547.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
EFL38065.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.788
EFL39315.1
ABC-type oligopeptide transport system.
  
 
 0.657
EFL38064.1
ABC-type dipeptide/oligopeptide transport system, permease component.
 
 
 0.583
EFL39316.1
Oligopeptide transport ATP-binding protein AppF; Truncated CDS; Belongs to the ABC transporter superfamily.
 
  
  0.574
EFL43422.1
Dipeptide transport system permease DppB.
 
 
 0.570
EFL39317.1
Oligopeptide ABC transporter, permease.
 
 
 0.564
EFL42812.1
ABC peptide transporter, permease component.
 
 
 0.562
EFL39311.1
Oligopeptide transport ATP-binding protein AppF; Belongs to the ABC transporter superfamily.
 
  
  0.558
EFL38546.1
Peptide/nickel/opine uptake family ABC transporter, permease.
 
 
 0.557
EFL38631.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein.
 
  
  0.557
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.