STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38547.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
EFL38065.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.812
EFL39315.1
ABC-type oligopeptide transport system.
  
 
 0.714
EFL38064.1
ABC-type dipeptide/oligopeptide transport system, permease component.
 
 
 0.596
EFL43422.1
Dipeptide transport system permease DppB.
 
 
 0.583
EFL39317.1
Oligopeptide ABC transporter, permease.
 
 
 0.577
EFL42812.1
ABC peptide transporter, permease component.
 
 
 0.576
EFL38546.1
Peptide/nickel/opine uptake family ABC transporter, permease.
 
 
 0.571
EFL41972.1
Zinc-binding carboxypeptidase.
     
  0.570
EFL39314.1
Peptide ABC transporter, permease.
 
 
 0.565
EFL38449.1
Transport permease.
 
 
 0.562
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.