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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38548.1Mucin-2. (467 aa)    
Predicted Functional Partners:
EFL42315.1
alpha-N-arabinofuranosidase 1.
 
  
 0.834
EFL38261.1
Conserved hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
 
 
 0.793
EFL42840.1
IolB.
   
    0.793
EFL40607.1
Pectinesterase/pectate lyase protein.
  
   
 0.709
EFL41494.1
alpha-N-arabinofuranosidase.
  
  
 0.678
EFL41514.1
Glycoside Hydrolase family 43.
 
 
 0.670
EFL43137.1
Secreted protein.
  
     0.665
EFL37773.1
Galactosidase.
  
  
 0.663
EFL42712.1
Secreted lyase.
  
     0.661
EFL37963.1
crp/Fnr family transcriptional regulator.
  
  
  0.654
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.