STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38551.1Glycosyl transferase, group 1. (378 aa)    
Predicted Functional Partners:
EFL38550.1
GDP-mannose 6-dehydrogenase AlgD; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 0.970
EFL38549.1
Glucosyltransferase.
 
 
 0.921
EFL38552.1
Membrane protein; Overlaps another CDS with the same product name.
  
 
 0.847
EFL38553.1
Membrane protein; Overlaps another CDS with the same product name.
  
 
 0.847
EFL38556.1
Conserved hypothetical protein.
 
     0.827
EFL38565.1
Membrane protein.
 
 
 0.816
EFL38561.1
Transferase.
 
  0.786
EFL38567.1
Membrane protein.
 
    0.786
EFL38566.1
Glycosyl transferase.
 
 
 0.753
EFL38555.1
Oxidoreductase.
 
  
 0.739
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.