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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38562.1GlcNAc-PI de-N-acetylase. (215 aa)    
Predicted Functional Partners:
EFL38560.1
Methyltransferase.
 
     0.969
EFL38561.1
Transferase.
 
    0.969
EFL38563.1
Epimerase/dehydratase.
 
    0.969
EFL38564.1
Aminopeptidase domain-containing protein.
 
     0.968
EFL38565.1
Membrane protein.
 
     0.930
EFL38559.1
Transferase.
 
 
 0.925
EFL38569.1
Glutamate-1-semialdehyde-2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.884
EFL38566.1
Glycosyl transferase.
 
   
 0.853
EFL42854.1
FldA protein.
    
 0.850
EFL38567.1
Membrane protein.
 
     0.837
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.