STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38564.1Aminopeptidase domain-containing protein. (427 aa)    
Predicted Functional Partners:
EFL38560.1
Methyltransferase.
 
 
   0.970
EFL38562.1
GlcNAc-PI de-N-acetylase.
 
     0.969
EFL38563.1
Epimerase/dehydratase.
 
     0.969
EFL38561.1
Transferase.
 
    0.964
EFL38565.1
Membrane protein.
 
     0.942
EFL38559.1
Transferase.
 
     0.940
EFL38567.1
Membrane protein.
 
     0.854
EFL38566.1
Glycosyl transferase.
 
     0.832
EFL38556.1
Conserved hypothetical protein.
 
     0.824
EFL38555.1
Oxidoreductase.
 
     0.808
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.