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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38575.13-oxoadipate:succinyl-CoA transferase, A subunit. (305 aa)    
Predicted Functional Partners:
EFL38576.1
3-oxoadipate:succinyl-CoA transferase, B subunit.
 0.998
EFL43173.1
3-oxoadipate CoA-transferase subunit B.
  
 0.981
EFL43328.1
succinyl-CoA:3-ketoacid-coenzyme A transferase, B subunit.
  
 0.981
EFL37876.1
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
 
 
 0.781
EFL38577.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.744
EFL37849.1
Fatty oxidation complex, alpha subunit.
  
 
 0.634
EFL38396.1
Fatty acid oxidation complex alpha-subunit.
  
 
 0.634
EFL43338.1
Fatty oxidation complex, alpha subunit.
  
 
 0.634
EFL37873.1
Protocatechuate 3,4-dioxygenase, beta subunit.
 
 
 0.615
EFL38574.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.599
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.