STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38594.1Translation initiation factor IF-2. (337 aa)    
Predicted Functional Partners:
EFL38592.1
Conserved hypothetical protein.
 
     0.969
EFL38593.1
ABC transporter, ATP-binding protein.
 
     0.887
EFL38595.1
Hypothetical protein.
       0.605
EFL38597.1
His Kinase A (phosphoacceptor) domain-containing protein.
 
     0.536
EFL37883.1
Sugar-binding lipoprotein.
  
     0.460
EFL37765.1
Membrane protein.
  
     0.451
EFL40265.1
Conserved hypothetical protein.
  
     0.435
EFL39640.1
Chloramphenicol 3-O phosphotransferase (CPT); Unextendable partial coding region.
  
     0.428
EFL42993.1
Transmembrane transporter.
  
     0.424
EFL42760.1
Heavy metal-associated domain-containing protein.
  
    0.403
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.