Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL38620.1ABC transporter, permease/ATP-binding protein. (119 aa)    
Predicted Functional Partners:
EFL38621.1
ABC transporter ATP-binding protein.
     0.984
EFL38619.1
Salicylate synthase.
  
  
 0.846
EFL37880.1
ABC transporter.
 
    
0.842
dnaK
Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.828
dnaK-2
Chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.828
EFL38622.1
ABC transporter, ATP-binding protein.
 
  
 
0.819
EFL41193.1
Ectoine/hydroxyectoine ABC transporter, ATP-binding protein.
 
    
0.815
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.814
EFL42063.1
Glutamine ABC transporter, ATP-binding protein.
 
    
0.786
EFL40433.1
ABC transporter, CydDC cysteine exporter.
 
    
0.754
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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