STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38623.1Methyltransferase domain-containing protein. (242 aa)    
Predicted Functional Partners:
EFL42069.1
precorrin-3B C(17)-methyltransferase.
  
  
 0.912
EFL38627.1
Conserved hypothetical protein.
 
     0.847
EFL42834.1
Precorrin-6x reductase.
  
 
 0.781
EFL42071.1
Precorrin-4 C11-methyltransferase.
  
  
 0.774
EFL38628.1
Enantio-pyochelin synthetase F; Overlaps another CDS with the same product name.
 
     0.723
EFL42068.1
precorrin-8X methylmutase.
  
 
 0.707
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.666
EFL42073.1
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
  
  
 0.644
EFL42835.1
precorrin-6A synthase (deacetylating).
  
  
 0.644
EFL39863.1
Band 7 protein.
 
     0.619
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.