STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38626.1Oxidoreductase family, NAD-binding Rossmann fold protein. (684 aa)    
Predicted Functional Partners:
EFL38630.1
Mycobactin biosynthesis enzyme MbtB.
 
  
 0.987
EFL38627.1
Conserved hypothetical protein.
 
   
 0.972
EFL38628.1
Enantio-pyochelin synthetase F; Overlaps another CDS with the same product name.
 
  
 0.965
EFL38629.1
Enantio-pyochelin synthetase F; Overlaps another CDS with the same product name.
 
  
 0.952
EFL38512.1
salicyl-AMP ligase.
 
  
 0.910
EFL38619.1
Salicylate synthase.
  
  
 0.870
EFL38164.1
Isochorismatase.
 
  
 0.846
EFL38624.1
Thioesterase.
 
  
 0.813
EFL41632.1
Dimodular nonribosomal peptide synthetase; Truncated CDS.
 
  
 0.615
EFL39371.1
Syringomycin synthetase.
  
  
 0.580
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.