Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL38645.1Nucleic acid binding, OB-fold, tRNA/helicase-type. (132 aa)    
Predicted Functional Partners:
EFL38644.1
Membrane protein.
       0.878
EFL38646.1
DNA-binding response regulator KdpE.
       0.807
EFL38640.1
Amino acid permease.
 
     0.797
EFL38643.1
Trk-type K+ transport system, NAD-binding component; Overlaps another CDS with the same product name.
  
     0.732
EFL38647.1
Sensor histidine kinase KdpD.
       0.713
EFL38642.1
Trk-type K+ transport system, NAD-binding component; Overlaps another CDS with the same product name.
  
     0.677
EFL38648.1
ABC transporter, ATP-binding protein.
     
 0.663
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
     
 0.641
EFL38649.1
Conserved hypothetical protein.
       0.627
EFL38651.1
Thioesterase.
       0.627
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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