STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38653.1Conserved hypothetical protein; Truncated CDS; unextendable partial coding region. (247 aa)    
Predicted Functional Partners:
EFL38654.1
Conserved hypothetical protein.
       0.860
EFL38655.1
Histidine kinase.
 
     0.755
EFL41864.1
Membrane protein.
  
     0.723
EFL41673.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.722
EFL38656.1
Transcriptional regulatory protein CutR.
       0.700
EFL39969.1
Alanine-rich protein.
  
     0.686
EFL40784.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.686
EFL42136.1
Conserved hypothetical protein.
  
     0.667
EFL39258.1
Integral membrane protein.
  
     0.658
EFL42708.1
Conserved hypothetical protein.
  
     0.650
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.