STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38665.1Conserved hypothetical protein. (326 aa)    
Predicted Functional Partners:
EFL37935.1
Conserved hypothetical protein.
  
    0.694
EFL37932.1
Conserved hypothetical protein.
  
     0.623
EFL38157.1
Conserved hypothetical protein.
  
     0.601
EFL38975.1
Conserved hypothetical protein.
  
     0.552
EFL38796.1
ABC transporter, permease.
  
     0.550
EFL38276.1
Toxin-antitoxin system, toxin component.
  
     0.512
EFL40265.1
Conserved hypothetical protein.
  
     0.479
EFL43369.1
Tat (twin-arginine translocation) pathway signal sequence domain-containing protein.
  
     0.474
EFL38319.1
Subtilisin inhibitor (SSI type); Belongs to the protease inhibitor I16 (SSI) family.
  
     0.451
EFL42799.1
PE-PGRS family protein.
 
  
  0.446
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.