Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38668.1Conserved hypothetical protein. (123 aa)    
Predicted Functional Partners:
EFL38670.1
PE-PGRS family protein.
 
     0.893
EFL38669.1
ATPase associated with various cellular activities, AAA_3.
 
    0.809
EFL38671.1
Nucleotide-binding oligomerization domain-containing protein 2.
 
     0.672
EFL38470.1
Translation initiation factor IF-2.
  
     0.650
EFL40602.1
Integral membrane protein.
  
     0.543
EFL38249.1
Radical SAM family Fe-S protein.
  
     0.529
EFL37995.1
ATP/GTP binding protein.
 
    0.520
EFL40603.1
ABC transport system transmembrane protein; Unextendable partial coding region.
  
     0.486
EFL38157.1
Conserved hypothetical protein.
  
     0.469
EFL40134.1
Secreted protein.
  
     0.465
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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