STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38670.1PE-PGRS family protein. (630 aa)    
Predicted Functional Partners:
EFL38669.1
ATPase associated with various cellular activities, AAA_3.
 
     0.953
EFL38668.1
Conserved hypothetical protein.
 
     0.893
EFL38671.1
Nucleotide-binding oligomerization domain-containing protein 2.
 
     0.852
EFL40793.1
Calcium binding protein.
  
 
 0.843
EFL43484.1
Polyketide synthase.
    
 0.791
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.786
EFL43010.1
Bifunctional P-450/NADPH-P450 reductase; Truncated CDS; unextendable partial coding region; Belongs to the cytochrome P450 family.
   
 0.769
EFL37342.1
Ribosylglycohydrolase.
 
 
  0.762
EFL40603.1
ABC transport system transmembrane protein; Unextendable partial coding region.
  
     0.750
EFL41696.1
Membrane protein.
  
 
 0.736
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.