STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38674.1Conserved hypothetical protein. (198 aa)    
Predicted Functional Partners:
EFL38673.1
Phosphodiesterase; Unextendable partial coding region.
 
     0.799
EFL41368.1
Membrane protein.
  
     0.753
tdk
Thymidine kinase.
 
     0.719
EFL38789.1
GCN5 N-acetyltransferase.
  
     0.694
EFL40173.1
Conserved hypothetical protein.
  
     0.671
EFL38675.1
GNAT family acetyltransferase.
 
     0.667
EFL42253.1
M50 family peptidase; Belongs to the peptidase M50B family.
  
     0.661
EFL38895.1
IclR family transcriptional regulator.
  
     0.596
EFL39300.1
Conserved hypothetical protein.
  
     0.592
EFL40042.1
Transferase; Belongs to the methyltransferase superfamily.
  
     0.586
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.