STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38678.1Transcriptional regulator. (234 aa)    
Predicted Functional Partners:
EFL40635.1
GntR family transcriptional regulator.
  
  
 0.775
EFL41744.1
Regulatory protein GntR, HTH.
  
     0.774
EFL38343.1
Transcriptional regulator.
  
  
 0.773
EFL37748.1
GntR-family regulatory protein.
  
     0.771
EFL42243.1
GntR family transcriptional regulator.
  
  
 0.764
EFL38062.1
GntR family transcriptional regulator.
  
  
 0.746
EFL38679.1
Membrane protein.
       0.739
EFL42508.1
GntR family transcriptional regulator.
  
     0.729
EFL38539.1
GntR family transcriptional regulator.
  
    0.724
EFL38680.1
Protease.
       0.654
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.