Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL38695.1Sporulation transcription factor, WhiH. (295 aa)    
Predicted Functional Partners:
EFL42030.1
Transcriptional regulator.
  
  
 0.747
EFL40181.1
GntR-family transcriptional regulator.
  
  
 0.742
EFL40635.1
GntR family transcriptional regulator.
  
     0.739
EFL37748.1
GntR-family regulatory protein.
  
  
 0.737
EFL38062.1
GntR family transcriptional regulator.
  
     0.735
EFL37406.1
GntR family transcriptional regulator.
  
  
 0.723
EFL37970.1
GntR-family transcriptional regulator.
  
  
 0.712
EFL37768.1
L-asparagine operon repressor (GntR family).
  
     0.710
EFL38539.1
GntR family transcriptional regulator.
  
     0.678
EFL38696.1
ABC transporter.
       0.657
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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