close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38695.1Sporulation transcription factor, WhiH. (295 aa)    
Predicted Functional Partners:
EFL42030.1
Transcriptional regulator.
  
  
 0.750
EFL40181.1
GntR-family transcriptional regulator.
  
  
 0.745
EFL37748.1
GntR-family regulatory protein.
  
  
 0.740
EFL40635.1
GntR family transcriptional regulator.
  
     0.739
EFL38062.1
GntR family transcriptional regulator.
  
     0.735
EFL37406.1
GntR family transcriptional regulator.
  
  
 0.727
EFL37970.1
GntR-family transcriptional regulator.
  
  
 0.715
EFL37768.1
L-asparagine operon repressor (GntR family).
  
     0.710
EFL38539.1
GntR family transcriptional regulator.
  
     0.678
EFL38698.1
Conserved hypothetical protein.
 
     0.631
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.