STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38698.1Conserved hypothetical protein. (395 aa)    
Predicted Functional Partners:
EFL38699.1
RecQ family ATP-dependent DNA helicase.
       0.778
EFL39969.1
Alanine-rich protein.
  
     0.717
EFL40457.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.711
EFL39028.1
Hypothetical hydrophilic protein.
  
     0.710
EFL42442.1
Secreted protein.
  
     0.709
EFL42502.1
Membrane protein.
  
     0.705
EFL39945.1
Conserved hypothetical protein.
  
     0.693
EFL40389.1
Membrane protein.
  
     0.688
EFL39675.1
Membrane protein.
  
     0.683
EFL40182.1
Conserved hypothetical protein.
  
     0.681
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.