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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38713.1Rhizobactin siderophore biosynthesis protein RhbC. (615 aa)    
Predicted Functional Partners:
EFL38712.1
Conserved hypothetical protein.
 
 
 0.967
EFL41231.1
Acetyltransferase.
 
 0.932
EFL41903.1
Alcaligin biosynthesis enzyme.
 
 
 0.924
EFL41232.1
Alcaligin biosynthesis enzyme.
 
 
 0.919
EFL41230.1
Siderophore synthetase component.
  
  0.877
EFL40514.1
Acetyltransferase.
 
 
 0.791
EFL41233.1
L-2,4-diaminobutyrate decarboxylase (DABA decarboxylase)(DABA-DC).
 
  
 0.729
EFL38711.1
ATP-dependent helicase DinG.
       0.652
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.526
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
  
 
 0.512
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.