STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38732.1Glutamate permease; Overlaps another CDS with the same product name. (225 aa)    
Predicted Functional Partners:
EFL38731.1
Glutamate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.999
EFL38733.1
Glutamate permease; Overlaps another CDS with the same product name.
 
0.999
EFL38730.1
Glutamate transport ATP-binding protein.
 
 0.998
EFL41193.1
Ectoine/hydroxyectoine ABC transporter, ATP-binding protein.
 
 0.986
EFL42063.1
Glutamine ABC transporter, ATP-binding protein.
 
 0.986
EFL41325.1
Sugar-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.942
EFL39177.1
Arginine/ornithine binding protein.
 0.872
EFL42061.1
ABC transporter substrate-binding protein.
 
 0.867
EFL39178.1
Arginine/ornithine transporter; Truncated CDS.
  
  
 
0.842
EFL41196.1
Ectoine/hydroxyectoine ABC transporter solute-binding protein.
 
 0.796
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.