STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38799.1Secreted sugar hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (237 aa)    
Predicted Functional Partners:
EFL38800.1
Conserved hypothetical protein.
 
 
  0.871
EFL42043.1
Secreted lyase.
  
  0.792
EFL42712.1
Secreted lyase.
  
  0.791
EFL40607.1
Pectinesterase/pectate lyase protein.
  
  
 0.787
EFL38805.1
Beta-glucosidase.
 
  
 0.783
EFL38804.1
Multiple sugar transport system substrate-binding protein.
 
     0.782
EFL42873.1
Endo-1,4-beta-xylanase B; Truncated CDS; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
  0.755
EFL38803.1
Transmembrane lipoprotein LplB.
       0.746
EFL38802.1
Conserved hypothetical protein.
       0.742
EFL37986.1
Cellulase.
  
     0.714
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.