Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38800.1Conserved hypothetical protein. (736 aa)    
Predicted Functional Partners:
EFL38799.1
Secreted sugar hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
 
     0.854
EFL38804.1
Multiple sugar transport system substrate-binding protein.
 
     0.839
EFL38803.1
Transmembrane lipoprotein LplB.
 
     0.834
EFL38802.1
Conserved hypothetical protein.
 
     0.828
EFL38801.1
Beta-galactosidase 1; Unextendable partial coding region.
       0.793
EFL39336.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
   
 0.771
EFL40710.1
Serine metalloprotease MprA.
   
 0.771
EFL41544.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
   
 0.771
EFL38260.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
 
   0.761
EFL42038.1
Conserved hypothetical protein.
  
 
   0.759
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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