STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38802.1Conserved hypothetical protein. (311 aa)    
Predicted Functional Partners:
EFL38804.1
Multiple sugar transport system substrate-binding protein.
 
 0.996
EFL38803.1
Transmembrane lipoprotein LplB.
 
 
 0.995
EFL38410.1
ABC-type sugar transport system, permease component.
 
 0.909
EFL43203.1
Sugar ABC transporter, permease.
 
 0.890
EFL41492.1
Sugar transporter membrane protein.
 
 0.889
EFL42825.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.886
EFL42882.1
ABC transporter, permease.
 
 0.876
EFL38391.1
Sugar transport system permease; Overlaps another CDS with the same product name.
 
 0.875
EFL40676.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.875
EFL42203.1
Sugar ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.873
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.