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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38809.14-aminobutyrate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (444 aa)    
Predicted Functional Partners:
EFL42655.1
Succinate-semialdehyde dehydrogenase.
  
 0.958
EFL38806.1
Succinate-semialdehyde dehydrogenase.
  
 0.954
EFL40837.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 0.943
EFL42471.1
Delta-aminovaleramide aminohydrolase.
 
 
 0.929
EFL40180.1
Aminotransferase class-III protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 
0.923
EFL39623.1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.921
EFL39508.1
Aldehyde dehydrogenase; Overlaps another CDS with the same product name.
 
 0.920
EFL41288.1
Methylmalonate-semialdehyde dehydrogenase.
  
 0.920
EFL42204.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.920
EFL43255.1
Succinate-semialdehyde dehydrogenase [NADP+] (SSDH).
  
 0.920
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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