Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL38820.1Glycerophosphoryl diester phosphodiesterase. (117 aa)    
Predicted Functional Partners:
EFL42462.1
Conserved hypothetical protein; Truncated CDS.
  
 
 0.744
EFL37879.1
Phospholipase C, phosphocholine-specific; Unextendable partial coding region.
   
 
  0.740
EFL40460.1
Phosphodiesterase.
    
  0.720
EFL41952.1
Glycerophosphodiesterase.
    
  0.720
EFL42350.1
Glycerophosphodiesterase.
    
  0.720
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
 
 0.713
EFL37962.1
Inositol-3-phosphate synthase.
   
 
 0.708
EFL40397.1
Inositol 1-phosphate synthase.
   
 
 0.708
EFL37832.1
Transferase.
  
 0.701
EFL37835.1
Transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 0.701
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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