STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38821.1Conserved hypothetical protein. (173 aa)    
Predicted Functional Partners:
EFL38822.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.767
EFL38823.1
AsnC family transcriptional regulator.
       0.693
EFL38824.1
Aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.693
EFL40454.1
Integral membrane protein.
  
     0.607
EFL38825.1
ABC transporter, ATP binding protein.
       0.532
EFL42404.1
Conserved hypothetical protein.
  
     0.527
EFL38704.1
Hydrolase.
  
     0.511
EFL42502.1
Membrane protein.
  
     0.511
EFL38826.1
Integral membrane protein.
       0.503
EFL40784.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.485
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.