STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38825.1ABC transporter, ATP binding protein. (247 aa)    
Predicted Functional Partners:
EFL38826.1
Integral membrane protein.
       0.878
EFL38827.1
Glyoxalase.
     
 0.853
EFL38592.1
Conserved hypothetical protein.
 0.776
EFL38794.1
ABC transporter, ATP-binding protein.
  
     0.771
EFL38823.1
AsnC family transcriptional regulator.
     
 0.766
EFL38635.1
Ferric citrate transport system ATP-binding protein.
 
     0.757
EFL40951.1
ABC lipoprotein transporter, permease component.
  
  0.751
EFL38822.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
     
 0.736
EFL38824.1
Aminotransferase, class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.730
EFL38828.1
Conserved hypothetical protein.
       0.718
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.