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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38830.1Conserved hypothetical protein. (265 aa)    
Predicted Functional Partners:
EFL37885.1
Xre family toxin-antitoxin system, antitoxin component.
   
 
 0.963
fbpC
Fe(3+) ions import ATP-binding protein FbpC; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.
       0.868
EFL38832.1
Sulfate transport system permease.
       0.868
EFL38833.1
Solute binding lipoprotein.
       0.868
rlmN
Cfr family radical SAM enzyme; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
       0.743
EFL38433.1
Xre family toxin-antitoxin system, antitoxin component.
 
   0.583
EFL37923.1
Xre family toxin-antitoxin system, antitoxin component.
 
   0.570
EFL40642.1
PbsX family transcriptional regulator.
 
   0.570
EFL38418.1
UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
  
 
 0.562
EFL40102.1
Tetratricopeptide TPR_2.
 
   0.559
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.