STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38861.1Conserved hypothetical protein. (498 aa)    
Predicted Functional Partners:
EFL40584.1
Membrane protein.
  
     0.769
EFL42502.1
Membrane protein.
  
     0.769
EFL40585.1
Integral membrane protein.
  
     0.759
EFL40333.1
Conserved hypothetical protein.
  
     0.756
EFL40566.1
Sporulation protein.
  
     0.751
EFL37840.1
Conserved hypothetical protein.
  
     0.745
EFL40182.1
Conserved hypothetical protein.
  
     0.741
EFL39506.1
Integral membrane protein.
  
     0.738
EFL40210.1
Conserved hypothetical protein.
  
     0.734
EFL41403.1
Membrane protein.
  
     0.732
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.