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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38870.1Conserved hypothetical protein. (221 aa)    
Predicted Functional Partners:
EFL38871.1
MarR family transcriptional regulator.
       0.807
EFL41910.1
Branched chain amino acid transport permease; Belongs to the binding-protein-dependent transport system permease family.
    
   0.785
EFL43119.1
Branched-chain amino acid ABC transport permease; Belongs to the binding-protein-dependent transport system permease family.
    
   0.785
EFL37669.1
Conserved hypothetical protein.
  
     0.667
EFL37975.1
Formate dehydrogenase, beta subunit.
    
  0.643
EFL38864.1
Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.572
EFL38867.1
Conserved hypothetical protein.
       0.572
EFL38868.1
Acylphosphatase.
       0.572
EFL38869.1
Hypothetical protein; Unextendable partial coding region.
       0.523
EFL37421.1
VanW like protein; Truncated CDS; unextendable partial coding region.
  
     0.434
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.