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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38885.1Conserved hypothetical protein. (166 aa)    
Predicted Functional Partners:
EFL38884.1
AsnC family transcriptional regulatory protein.
       0.846
EFL38882.1
Phosphomethylpyrimidine kinase.
       0.750
thiL
Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.750
EFL39199.1
Integral membrane protein.
  
     0.738
EFL42393.1
Membrane protein.
  
     0.676
lpqB
Lipoprotein LpqB.
  
     0.578
EFL38915.1
Membrane protein.
  
     0.562
EFL40976.1
Conserved hypothetical protein.
  
     0.554
EFL41794.1
Membrane protein.
  
     0.554
EFL41023.1
Integral membrane regulatory protein.
  
     0.541
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.