STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38910.1ATP/GTP-binding protein. (174 aa)    
Predicted Functional Partners:
EFL38909.1
Conserved hypothetical protein.
 
  
 0.948
EFL38908.1
roadblock/LC7 domain-containing protein.
 
   0.945
EFL38904.1
roadblock/LC7 domain-containing protein.
 
   0.921
EFL42276.1
roadblock/LC7 domain-containing protein.
 
 
 0.911
EFL39161.1
roadblock/LC7 domain-containing protein.
 
   0.899
EFL38330.1
roadblock/LC7 domain-containing protein.
 
 
 0.898
EFL37237.1
roadblock/LC7 domain-containing protein.
 
 
 0.897
EFL42677.1
roadblock/LC7 domain-containing protein.
 
 
 0.897
EFL39454.1
roadblock/LC7 domain-containing protein.
 
 
 0.896
EFL42514.1
roadblock/LC7 domain-containing protein.
 
 
 0.896
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.