STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38915.1Membrane protein. (293 aa)    
Predicted Functional Partners:
EFL38916.1
2-isopropylmalate synthase/homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.773
EFL39336.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
   
 0.771
EFL40710.1
Serine metalloprotease MprA.
   
 0.771
EFL41544.1
Peptidase, S8A (subtilisin) subfamily; Belongs to the peptidase S8 family.
   
 0.771
EFL42393.1
Membrane protein.
  
     0.742
EFL39469.1
Regulatory protein.
  
 
   0.740
EFL41756.1
Conserved hypothetical protein.
  
     0.700
EFL41794.1
Membrane protein.
  
     0.685
EFL39199.1
Integral membrane protein.
  
     0.682
EFL40125.1
Conserved hypothetical protein.
  
     0.677
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.